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	<title>Comments on: Compiling UMFPACK</title>
	<atom:link href="http://matrixprogramming.com/2008/03/umfpack/feed" rel="self" type="application/rss+xml" />
	<link>http://matrixprogramming.com/2008/03/umfpack</link>
	<description>Compiling numerical libraries</description>
	<lastBuildDate>Tue, 15 May 2012 02:26:33 +0000</lastBuildDate>
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	<item>
		<title>By: Evgenii Rudnyi</title>
		<link>http://matrixprogramming.com/2008/03/umfpack/comment-page-1#comment-865</link>
		<dc:creator>Evgenii Rudnyi</dc:creator>
		<pubDate>Fri, 06 Jan 2012 09:16:18 +0000</pubDate>
		<guid isPermaLink="false">http://1.rudnyi.peterhost.ru/?p=363#comment-865</guid>
		<description>It is included with gcc 3 in Cygwin. Yet I should say that my ATLAS version is quite old and it might be good to search for somewhat newer version of BLAS:

http://matrixprogramming.com/2010/08/blas-basic-linear-algebra-system</description>
		<content:encoded><![CDATA[<p>It is included with gcc 3 in Cygwin. Yet I should say that my ATLAS version is quite old and it might be good to search for somewhat newer version of BLAS:</p>
<p><a href="http://matrixprogramming.com/2010/08/blas-basic-linear-algebra-system" rel="nofollow">http://matrixprogramming.com/2010/08/blas-basic-linear-algebra-system</a></p>
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	</item>
	<item>
		<title>By: M</title>
		<link>http://matrixprogramming.com/2008/03/umfpack/comment-page-1#comment-864</link>
		<dc:creator>M</dc:creator>
		<pubDate>Fri, 06 Jan 2012 07:18:03 +0000</pubDate>
		<guid isPermaLink="false">http://1.rudnyi.peterhost.ru/?p=363#comment-864</guid>
		<description>Hey Evgenii,

I&#039;m trying to install umfpack on my Windows machine, and the download link for the precompiled atlas doesn&#039;t seem to include libg2c.a - any idea where I could find it?

Thanks!
M</description>
		<content:encoded><![CDATA[<p>Hey Evgenii,</p>
<p>I&#8217;m trying to install umfpack on my Windows machine, and the download link for the precompiled atlas doesn&#8217;t seem to include libg2c.a &#8211; any idea where I could find it?</p>
<p>Thanks!<br />
M</p>
]]></content:encoded>
	</item>
	<item>
		<title>By: Néstor</title>
		<link>http://matrixprogramming.com/2008/03/umfpack/comment-page-1#comment-843</link>
		<dc:creator>Néstor</dc:creator>
		<pubDate>Tue, 18 Oct 2011 08:50:08 +0000</pubDate>
		<guid isPermaLink="false">http://1.rudnyi.peterhost.ru/?p=363#comment-843</guid>
		<description>Thanks for the info Evgenii !

I have downloaded a precompiled version of ATLAS for LINUX and now it compiles perfectly !

It is only a 5% faster than without BLAS ... at least it was worth the try !

Thanks for all your help.

Néstor.</description>
		<content:encoded><![CDATA[<p>Thanks for the info Evgenii !</p>
<p>I have downloaded a precompiled version of ATLAS for LINUX and now it compiles perfectly !</p>
<p>It is only a 5% faster than without BLAS &#8230; at least it was worth the try !</p>
<p>Thanks for all your help.</p>
<p>Néstor.</p>
]]></content:encoded>
	</item>
	<item>
		<title>By: Evgenii Rudnyi</title>
		<link>http://matrixprogramming.com/2008/03/umfpack/comment-page-1#comment-842</link>
		<dc:creator>Evgenii Rudnyi</dc:creator>
		<pubDate>Mon, 17 Oct 2011 21:08:07 +0000</pubDate>
		<guid isPermaLink="false">http://1.rudnyi.peterhost.ru/?p=363#comment-842</guid>
		<description>This means that the ATLAS library that you use does not belong to the platform on which you would like to employ it (say the library from Windows will not work on Unix). Basically you have to compile ATLAS for that platform (or to use another optimized BLAS for that platform).</description>
		<content:encoded><![CDATA[<p>This means that the ATLAS library that you use does not belong to the platform on which you would like to employ it (say the library from Windows will not work on Unix). Basically you have to compile ATLAS for that platform (or to use another optimized BLAS for that platform).</p>
]]></content:encoded>
	</item>
	<item>
		<title>By: Néstor</title>
		<link>http://matrixprogramming.com/2008/03/umfpack/comment-page-1#comment-841</link>
		<dc:creator>Néstor</dc:creator>
		<pubDate>Mon, 17 Oct 2011 07:44:03 +0000</pubDate>
		<guid isPermaLink="false">http://1.rudnyi.peterhost.ru/?p=363#comment-841</guid>
		<description>When I write :


nm libf77blas.a &#124; grep -i dgemm


it prints in screen ...

------------------------------------------------------------

nm: srotg.o: File format not recognized
nm: srotmg.o: File format not recognized
nm: sscal.o: File format not recognized
nm: snrm2.o: File format not recognized
nm: sasum.o: File format not recognized
nm: isamax.o: File format not recognized
nm: saxpy.o: File format not recognized
nm: scopy.o: File format not recognized
nm: sswap.o: File format not recognized
nm: srot.o: File format not recognized
nm: srotm.o: File format not recognized
nm: sdot.o: File format not recognized
nm: dsdot.o: File format not recognized
nm: sdsdot.o: File format not recognized
nm: ATL_F77wrap_srotg.o: File format not recognized
nm: ATL_F77wrap_srotmg.o: File format not recognized
nm: ATL_F77wrap_sscal.o: File format not recognized
nm: ATL_F77wrap_snrm2.o: File format not recognized
nm: ATL_F77wrap_sasum.o: File format not recognized
nm: ATL_F77wrap_isamax.o: File format not recognized
nm: ATL_F77wrap_saxpy.o: File format not recognized
nm: ATL_F77wrap_scopy.o: File format not recognized
nm: ATL_F77wrap_sswap.o: File format not recognized
nm: ATL_F77wrap_srot.o: File format not recognized
nm: ATL_F77wrap_srotm.o: File format not recognized
nm: ATL_F77wrap_sdot.o: File format not recognized
nm: ATL_F77wrap_dsdot.o: File format not recognized
nm: ATL_F77wrap_sdsdot.o: File format not recognized

------------------------------------------------------------

and it keeps going with many other files, I think it does not reconize even one of the files.

What does it mean ???

Thank you in advance.

Néstor.</description>
		<content:encoded><![CDATA[<p>When I write :</p>
<p>nm libf77blas.a | grep -i dgemm</p>
<p>it prints in screen &#8230;</p>
<p>&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;</p>
<p>nm: srotg.o: File format not recognized<br />
nm: srotmg.o: File format not recognized<br />
nm: sscal.o: File format not recognized<br />
nm: snrm2.o: File format not recognized<br />
nm: sasum.o: File format not recognized<br />
nm: isamax.o: File format not recognized<br />
nm: saxpy.o: File format not recognized<br />
nm: scopy.o: File format not recognized<br />
nm: sswap.o: File format not recognized<br />
nm: srot.o: File format not recognized<br />
nm: srotm.o: File format not recognized<br />
nm: sdot.o: File format not recognized<br />
nm: dsdot.o: File format not recognized<br />
nm: sdsdot.o: File format not recognized<br />
nm: ATL_F77wrap_srotg.o: File format not recognized<br />
nm: ATL_F77wrap_srotmg.o: File format not recognized<br />
nm: ATL_F77wrap_sscal.o: File format not recognized<br />
nm: ATL_F77wrap_snrm2.o: File format not recognized<br />
nm: ATL_F77wrap_sasum.o: File format not recognized<br />
nm: ATL_F77wrap_isamax.o: File format not recognized<br />
nm: ATL_F77wrap_saxpy.o: File format not recognized<br />
nm: ATL_F77wrap_scopy.o: File format not recognized<br />
nm: ATL_F77wrap_sswap.o: File format not recognized<br />
nm: ATL_F77wrap_srot.o: File format not recognized<br />
nm: ATL_F77wrap_srotm.o: File format not recognized<br />
nm: ATL_F77wrap_sdot.o: File format not recognized<br />
nm: ATL_F77wrap_dsdot.o: File format not recognized<br />
nm: ATL_F77wrap_sdsdot.o: File format not recognized</p>
<p>&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;</p>
<p>and it keeps going with many other files, I think it does not reconize even one of the files.</p>
<p>What does it mean ???</p>
<p>Thank you in advance.</p>
<p>Néstor.</p>
]]></content:encoded>
	</item>
	<item>
		<title>By: Evgenii Rudnyi</title>
		<link>http://matrixprogramming.com/2008/03/umfpack/comment-page-1#comment-840</link>
		<dc:creator>Evgenii Rudnyi</dc:creator>
		<pubDate>Sat, 15 Oct 2011 14:03:14 +0000</pubDate>
		<guid isPermaLink="false">http://1.rudnyi.peterhost.ru/?p=363#comment-840</guid>
		<description>The message says that the linker cannot find the blas routines. To understand why, try for example

nm libf77blas.a &#124; grep -i dgemm

to see what functions are there.</description>
		<content:encoded><![CDATA[<p>The message says that the linker cannot find the blas routines. To understand why, try for example</p>
<p>nm libf77blas.a | grep -i dgemm</p>
<p>to see what functions are there.</p>
]]></content:encoded>
	</item>
	<item>
		<title>By: Néstor</title>
		<link>http://matrixprogramming.com/2008/03/umfpack/comment-page-1#comment-838</link>
		<dc:creator>Néstor</dc:creator>
		<pubDate>Fri, 14 Oct 2011 07:52:26 +0000</pubDate>
		<guid isPermaLink="false">http://1.rudnyi.peterhost.ru/?p=363#comment-838</guid>
		<description>Hi again !

Now i am trying to compile UMFPACK with ATLAS in a UNIX cluster and I have the same problem as before with the solaris machine ...

The path to blas I set it to: BLAS = -L ../../lib/windows -lf77blas -latlas -lg2c

------------------------------------------------------------

The error messages I get are:

icc    -O3  -I../Include -I../../AMD/Include -I../../UFconfig -o umfpack_di_demo umfpack_di_demo.c ../Lib/libumfpack.a ../../AMD/Lib/libamd.a -L ../../lib/windows -lf77blas -latlas -lg2c  -lm
umfpack_di_demo.c(96): (col. 5) remark: LOOP WAS VECTORIZED.
../Lib/libumfpack.a(umf_di_local_search.o)(.text+0x6ea): In function `umfdi_local_search&#039;:
: undefined reference to `dtrsv_&#039;
../Lib/libumfpack.a(umf_di_local_search.o)(.text+0x9cf): In function `umfdi_local_search&#039;:
: undefined reference to `dgemv_&#039;
../Lib/libumfpack.a(umf_di_blas3_update.o)(.text+0xf0): In function `umfdi_blas3_update&#039;:
: undefined reference to `dtrsm_&#039;
../Lib/libumfpack.a(umf_di_blas3_update.o)(.text+0x18c): In function `umfdi_blas3_update&#039;:
: undefined reference to `dgemm_&#039;
../Lib/libumfpack.a(umf_di_blas3_update.o)(.text+0x1fe): In function `umfdi_blas3_update&#039;:
: undefined reference to `dger_&#039;
make[1]: *** [umfpack_di_demo] Error 1
make[1]: Leaving directory `/home/afm/afmnrg/Q^3UIC_intel/SPARS/UMFPACK/Demo&#039;



------------------------------------------------------------
Any idea what I am doing wrong ??</description>
		<content:encoded><![CDATA[<p>Hi again !</p>
<p>Now i am trying to compile UMFPACK with ATLAS in a UNIX cluster and I have the same problem as before with the solaris machine &#8230;</p>
<p>The path to blas I set it to: BLAS = -L ../../lib/windows -lf77blas -latlas -lg2c</p>
<p>&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;</p>
<p>The error messages I get are:</p>
<p>icc    -O3  -I../Include -I../../AMD/Include -I../../UFconfig -o umfpack_di_demo umfpack_di_demo.c ../Lib/libumfpack.a ../../AMD/Lib/libamd.a -L ../../lib/windows -lf77blas -latlas -lg2c  -lm<br />
umfpack_di_demo.c(96): (col. 5) remark: LOOP WAS VECTORIZED.<br />
../Lib/libumfpack.a(umf_di_local_search.o)(.text+0x6ea): In function `umfdi_local_search&#8217;:<br />
: undefined reference to `dtrsv_&#8217;<br />
../Lib/libumfpack.a(umf_di_local_search.o)(.text+0x9cf): In function `umfdi_local_search&#8217;:<br />
: undefined reference to `dgemv_&#8217;<br />
../Lib/libumfpack.a(umf_di_blas3_update.o)(.text+0xf0): In function `umfdi_blas3_update&#8217;:<br />
: undefined reference to `dtrsm_&#8217;<br />
../Lib/libumfpack.a(umf_di_blas3_update.o)(.text+0x18c): In function `umfdi_blas3_update&#8217;:<br />
: undefined reference to `dgemm_&#8217;<br />
../Lib/libumfpack.a(umf_di_blas3_update.o)(.text+0x1fe): In function `umfdi_blas3_update&#8217;:<br />
: undefined reference to `dger_&#8217;<br />
make[1]: *** [umfpack_di_demo] Error 1<br />
make[1]: Leaving directory `/home/afm/afmnrg/Q^3UIC_intel/SPARS/UMFPACK/Demo&#8217;</p>
<p>&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;&#8212;<br />
Any idea what I am doing wrong ??</p>
]]></content:encoded>
	</item>
	<item>
		<title>By: Evgenii Rudnyi</title>
		<link>http://matrixprogramming.com/2008/03/umfpack/comment-page-1#comment-831</link>
		<dc:creator>Evgenii Rudnyi</dc:creator>
		<pubDate>Mon, 26 Sep 2011 18:29:35 +0000</pubDate>
		<guid isPermaLink="false">http://1.rudnyi.peterhost.ru/?p=363#comment-831</guid>
		<description>No, UMFPACK cannot work with the coordinate format directly (MUMPS does). You may want to look at BeBOP

http://matrixprogramming.com/2008/07/bebop

or use my SparseMatrix, see

http://matrixprogramming.com/2011/06/sample-code-in-c-to-run-sparse-solvers</description>
		<content:encoded><![CDATA[<p>No, UMFPACK cannot work with the coordinate format directly (MUMPS does). You may want to look at BeBOP</p>
<p><a href="http://matrixprogramming.com/2008/07/bebop" rel="nofollow">http://matrixprogramming.com/2008/07/bebop</a></p>
<p>or use my SparseMatrix, see</p>
<p><a href="http://matrixprogramming.com/2011/06/sample-code-in-c-to-run-sparse-solvers" rel="nofollow">http://matrixprogramming.com/2011/06/sample-code-in-c-to-run-sparse-solvers</a></p>
]]></content:encoded>
	</item>
	<item>
		<title>By: Néstor</title>
		<link>http://matrixprogramming.com/2008/03/umfpack/comment-page-1#comment-830</link>
		<dc:creator>Néstor</dc:creator>
		<pubDate>Mon, 26 Sep 2011 17:23:30 +0000</pubDate>
		<guid isPermaLink="false">http://1.rudnyi.peterhost.ru/?p=363#comment-830</guid>
		<description>One question more,

Which is the most efficient way of transforming a SPARSE MATRIX from COO format to CCF format ?? Has umfpack any function for that ??

And can UMPFACK work with the COO format ??

Thank you in advance.

Néstor.</description>
		<content:encoded><![CDATA[<p>One question more,</p>
<p>Which is the most efficient way of transforming a SPARSE MATRIX from COO format to CCF format ?? Has umfpack any function for that ??</p>
<p>And can UMPFACK work with the COO format ??</p>
<p>Thank you in advance.</p>
<p>Néstor.</p>
]]></content:encoded>
	</item>
	<item>
		<title>By: Néstor</title>
		<link>http://matrixprogramming.com/2008/03/umfpack/comment-page-1#comment-829</link>
		<dc:creator>Néstor</dc:creator>
		<pubDate>Mon, 26 Sep 2011 07:41:19 +0000</pubDate>
		<guid isPermaLink="false">http://1.rudnyi.peterhost.ru/?p=363#comment-829</guid>
		<description>Thanks Evgenii,

I am running it without Blass and it is really fast:

It takes around 0.05 seconds to solve my system while LAPACK solver was taking almost 3 s. I guess I do not need BLAS, I am quite happy with the speedup ! :)

Thanks for your help.

Néstor.</description>
		<content:encoded><![CDATA[<p>Thanks Evgenii,</p>
<p>I am running it without Blass and it is really fast:</p>
<p>It takes around 0.05 seconds to solve my system while LAPACK solver was taking almost 3 s. I guess I do not need BLAS, I am quite happy with the speedup ! :)</p>
<p>Thanks for your help.</p>
<p>Néstor.</p>
]]></content:encoded>
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